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- SEED Viewer Subsystem Page ...ystem' menu in the green bar at the top of the page to view the 'Populated Subsystem' spreadsheet or to 'View Notes' for this susbystem.<br>3 KB (585 words) - 14:09, 7 November 2006
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- ...system'''. The subsystem name links to its [[SEED_Viewer_Manual/Subsystems|Subsystem]] page. The name of the '''Scenario''' is displayed in the fourth column. T1 KB (197 words) - 13:11, 3 December 2008
- ...erent tabs show you information about the '''Size Distribution''', the '''Subsystem Coverage''' and '''Quality Control''' of the FIGfams. === Subsystem Coverage ===1 KB (209 words) - 05:44, 4 December 2008
- SEED Viewer Subsystem Page ...ystem' menu in the green bar at the top of the page to view the 'Populated Subsystem' spreadsheet or to 'View Notes' for this susbystem.<br>3 KB (585 words) - 14:09, 7 November 2006
- === Subsystem Information === ...nized in a tab view, where the first tab shows a graphical overview of the subsystem information, while the second part lists all features in subsystems in a [[4 KB (602 words) - 09:48, 18 November 2008
- ...features with assigned with the functional role that are part of the given subsystem. ...imilarities|Similarities]] of all '''reference feature''' (features in the subsystem that are assigned with the function) to the features of the selected genome2 KB (384 words) - 11:21, 2 December 2008
- | '''[[FidSearch]]''' || Display genes from one or more genomes filtered by subsystem or keywords. | '''[[SubSearch]]''' || Search for genes in a given subsystem or subsystem class.2 KB (268 words) - 12:51, 26 July 2007
- ...f the search will be displayed in up to 4 tables, a Functional Role table, Subsystem table,Features table and Organisms table.<br> ...quick search' option, the results will be limited to functionals role in a subsystem.3 KB (582 words) - 15:09, 7 November 2006
- ...temPaperSupplementalMaterial/index.html Supplementary material for the NAR Subsystem Paper]304 bytes (42 words) - 13:03, 16 August 2006
- ...lumns ('''Category''', '''Subcategory''' and '''Subsystem''') describe the subsystem the functional role belongs to. The functional role itself is displayed in ...for that feature. The following column '''SS active A''' tells you if the subsystem listed in the line is active in the Organism A, meaning that it has a valid2 KB (342 words) - 09:43, 2 December 2008
- : The number of different subsystem in which at least one member was found in the fragments of the genome. * ''Subsystem Counts''3 KB (544 words) - 12:48, 15 August 2007
- :in a subsystem, and a graphic displaying it's genomic context. If this feature's function :If this feature is included in a subsystem detailed information about this feature's role or roles in one or more subs2 KB (408 words) - 15:24, 7 November 2006
- A [[Glossary#Subsystem|subsystem]] is a collection of [[Glossary#Functional role|functional roles]] that are ...notes. The last tab displays the [[Glossary#Scenarios|Scenarios]] for the subsystem.8 KB (1,271 words) - 09:13, 12 December 2008
- * ''Subsystem Counts'' ...umber of coding sequences which are part of the according group, subgroup, subsystem or role.4 KB (626 words) - 11:13, 3 October 2007
- - Subsystem Names - Subsystem Names1 KB (227 words) - 07:33, 26 November 2008
- ...t part of the top table shows the '''Functional Role''' and the context '''Subsystem'''. If present, an '''EC-number''' or '''GO-number''' and '''Reactions''' a2 KB (268 words) - 14:30, 3 December 2008
- ...|Subsystem Page]]. You can narrow the selection by typing in a part of the subsystem name into the field on top of the select box. ...it may take forever). If you already know that you are looking for, e.g. a subsystem, it would be faster to use the Subsystems tab.4 KB (663 words) - 12:10, 15 December 2008
- other genes from the same subsystem (very strong evidence). There may be several of these for a PEG (up to one for each subsystem the PEG8 KB (1,348 words) - 16:32, 30 April 2008
- ...are linked to the [[SEED_Viewer_Manual/Subsystems|Subsystems Page]] of the subsystem. The '''FIGfam Size''' is the number of members of the FIGfam. The '''Avera ...tation|Annotation Page]]), the '''Organism''' it belongs to, '''Associated Subsystem''' (there can be more than one) and the function of the member. You can exp2 KB (361 words) - 15:07, 3 December 2008
- This page list the subsystem(s) for a functional role and if present, EC number, associated GO terms, an536 bytes (87 words) - 14:23, 7 November 2006
- ...oles and attempt to accurately identify exactly what variant, if any, of a subsystem exists in each of the genomes. please see [[#SubsystemClearinghouse|Subsystem Clearinghouse]]11 KB (1,758 words) - 11:50, 3 December 2008