Difference between revisions of "SEED Viewer Manual/AlignSeqs"

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(Align Sequences)
(Align Sequences)
 
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This page is usually loaded if you have selected a number of features in e.g. the [[SEED_Viewer_Manual/Evidence|Evidence Page]] and pressed an '''Align Sequences''' button. Here, the alignment is presented. The alignment software that is used is [http://www.tcoffee.org/Projects_home_page/t_coffee_home_page.html T-Coffee], a method for fast and accurate multiple sequence alignment.
 
This page is usually loaded if you have selected a number of features in e.g. the [[SEED_Viewer_Manual/Evidence|Evidence Page]] and pressed an '''Align Sequences''' button. Here, the alignment is presented. The alignment software that is used is [http://www.tcoffee.org/Projects_home_page/t_coffee_home_page.html T-Coffee], a method for fast and accurate multiple sequence alignment.
  
On the top of the alignment, you can see a color legend for aligned regions.  
+
On the top of the alignment, you can see a color legend for aligned regions. Below, the multiple alignment for all chosen features is displayed.
  
 
[[Image:AlignSeqs.png]]
 
[[Image:AlignSeqs.png]]

Latest revision as of 10:49, 5 December 2008

Align Sequences

This page is usually loaded if you have selected a number of features in e.g. the Evidence Page and pressed an Align Sequences button. Here, the alignment is presented. The alignment software that is used is T-Coffee, a method for fast and accurate multiple sequence alignment.

On the top of the alignment, you can see a color legend for aligned regions. Below, the multiple alignment for all chosen features is displayed.

AlignSeqs.png