SEED Viewer Manual/Subsystems

Subsystems

A subsystem is a collection of functional roles that are associated to each other in a system. Such a system can be a metabolic pathway, a component if a cell like a secretion system and others.

The subsystem page in the SeedViewer is divided into different parts via a TabView. The TabView can consist of 3-5 tabs. The first tab shows a Diagram of the subsystem, the second tab displays a table with the Functional Roles present in the subsystem. The Spreadsheet showing relating the functional roles in the subsystem to features in genomes can be found in the third tab.

Diagram

Functional Roles

Spreadsheet