Difference between revisions of "NMPDR Search"
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(Overview of the NMPDR Search Facility) |
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Revision as of 14:43, 23 July 2007
The NMPDR search facility provides many different ways to look for genes, genomes, or sequences in the NMPDR database. The following searches are currently supported.
| OpSearch | Display genes of a single genome organized into operons. |
| WordSearch | Display genes that match certain keywords. |
| FidSearch | Display genes from one or more genomes filtered by subsystem or keywords. |
| SigGenes | Display genes that are common to a set of genomes, or that differentiate between two sets of genomes. |
| ToolSearch | Search for genes or DNA using BLAST or pattern-matching. |
| SubSearch | Search for genes in a given subsystem or subsystem class. |
| DrugSearch | Show in silico docking results for select PDBs. |
All NMPDR searches allow you to download results in tab-delimited and XML formats. NMPDR searches that return a list of genes allow you to download the genes in FASTA format.