SEED Viewer Manual/ShowSeqs
Revision as of 06:56, 1 December 2008 by DanielaBartels (talk | contribs) (→Display fasta sequences)
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Display fasta sequences
This page shows sequences of given features. Usually, you enter this page from a page where you have selected a number of sequences. You can download or display the sequences using the Download Sequences or Show Fasta buttons. The header of the fasta sequences is in the format >feature_id [Organism id] [annotation]. You can choose between three options for the sequences:
1) DNA Sequence
Provides you with the DNA sequence in fasta format.
2) DNA Sequence with flanking
Also DNA sequence, but it adds a number of bases upstream and downstream to the feature. The sequence of the feature will then appear in upper-case letters, while the flanking sequences will be lower-case.
3) Protein Sequence
The protein sequence (translated DNA).
