Difference between revisions of "Home of the SEED"

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With the growing number of genomes becoming available, a software environment is needed to produce accurate and consistent annotations. The SEED is that environment. We provide a public [http://seedviewer.theseed.org/FIG/index.cgi  SEED-Viewer]  that allows read-only access to  the latest data and annotations. For users interested in editing and learning how to use the system, we also provide a [http://theseed.uchicago.edu/FIG/index.cgi Trial-SEED]. As described in our [[Annotating_1000_genomes|manifesto]] the [[Glossary#annotation|annotation]] is not performed on a gene by gene basis per genome, but rather by [[Glossary#subsystem|subsystem]] by an expert curator across many genomes at a time.  
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With the growing number of genomes becoming available, a software environment is needed to produce accurate and consistent annotations. The SEED is that environment. We provide a public [http://seed-viewer.theseed.org/FIG/index.cgi  SEED-Viewer]  that allows read-only access to  the latest data and annotations. For users interested in editing and learning how to use the system, we also provide a [http://theseed.uchicago.edu/FIG/index.cgi Trial-SEED]. As described in our [[Annotating_1000_genomes|manifesto]] the [[Glossary#annotation|annotation]] is not performed on a gene by gene basis per genome, but rather by [[Glossary#subsystem|subsystem]] by an expert curator across many genomes at a time.  
  
  

Revision as of 21:20, 23 August 2006

With the growing number of genomes becoming available, a software environment is needed to produce accurate and consistent annotations. The SEED is that environment. We provide a public SEED-Viewer that allows read-only access to the latest data and annotations. For users interested in editing and learning how to use the system, we also provide a Trial-SEED. As described in our manifesto the annotation is not performed on a gene by gene basis per genome, but rather by subsystem by an expert curator across many genomes at a time.



We make all our software and data available for download and use on our DownloadPage page.