SOPs

SEED standard operating procedures

To generate data that is useful to the various communities involved in the process of annotation and use of annotations, we make available our standard operating procedures.

• Annotation
  • Annotating a genome with the 48-hour service (NMPDR|SOP005)
  • Creation of GO-terms (NMPDR|SOP004)
• BRC
  • File:Brc upload sop.pdf -- Creating and uploading GFF3 files

• Obsolete SOPs
  • Gene calling (NMPDR|SOP001)
  • Annotation of close strain sets(NMPDR|SOP002)
  • Adding Genomes to the NMPDR (NMPDR|SOP003)