SeedViewer Organism

Organism Page in SEED Viewer

In the green bar at the top of the page adjacent to the homepage symbol is pulldown menu
labeled 'This Organism' with the following 4 display options for this page:

Overview

The top of page provides summary statistics for this genome including the numbers of subsystems, coding sequences, RNAs and other background information.

A breakdown of the number of PEGs with hypothetical and non-hypothetical function assignments is provided in box in the top right corner of the page.

Adjacent to the Taxonomy ID is the Wikipedia Globe that is linked to the Wikipedia entry for this organism.

On the bottom left of the page a bar graph depicts the percentages of PEGs for this genome that are present in at least one subsystem.

Next to the bar graph a pie chart and accompanying expandable hierarchical tree, color coded to match the pie chart, organizes the subsystems

present in this genome by cellular process.

At every level in the tree the number of PEGs in each category is listed in parentheses.

At the leaves of the tree are links to a Subsytem page in the SEED Viewer.

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