Difference between revisions of "SEED Viewer Manual/Find"
| Line 11: | Line 11: | ||
Organisms | Organisms | ||
| − | + | Subsystem Names | |
Feature IDs | Feature IDs | ||
| Line 19: | Line 19: | ||
If a perfect match is found, it returns the page for that match in that category (e.g. if you search for Escherichia coli K12, the SeedViewer will load the [[SEED_Viewer_Manual/OrganismPage|Organism Page]] for that organism. | If a perfect match is found, it returns the page for that match in that category (e.g. if you search for Escherichia coli K12, the SeedViewer will load the [[SEED_Viewer_Manual/OrganismPage|Organism Page]] for that organism. | ||
| − | If no perfect match is found, the | + | If no perfect match is found, it will search the following categories using an infix search (meaning that the keyword can be part of an organism, functional role etc.): |
| + | |||
| + | Functional Roles | ||
| + | |||
| + | Organisms | ||
| + | |||
| + | Subsystem Names | ||
| + | |||
| + | Feature Annotations | ||
| + | |||
| + | The infix search may take a while. You will get a page that lists all search results for your search. | ||
=== Special features === | === Special features === | ||
If your page has a defined genome (e.g. [[SEED_Viewer_Manual/OrganismPage|Organism Page]], [[SEED_Viewer_Manual/Annotation|Annotation Page]]), you can type in a number and it will open the Annotation page for the feature ending with that number. This is helpful if you want to browse through Annotation pages of many features in a genome. | If your page has a defined genome (e.g. [[SEED_Viewer_Manual/OrganismPage|Organism Page]], [[SEED_Viewer_Manual/Annotation|Annotation Page]]), you can type in a number and it will open the Annotation page for the feature ending with that number. This is helpful if you want to browse through Annotation pages of many features in a genome. | ||
Revision as of 06:32, 26 November 2008
Find
The Find Window is present on every page in the SeedViewer. Type in a text and press the button Find to search for your keyword.
What it does
The given keyword is used to first search different categories in the SEED database for a perfect match (fast search) in the following order:
Organisms
Subsystem Names
Feature IDs
Aliases to Features
If a perfect match is found, it returns the page for that match in that category (e.g. if you search for Escherichia coli K12, the SeedViewer will load the Organism Page for that organism.
If no perfect match is found, it will search the following categories using an infix search (meaning that the keyword can be part of an organism, functional role etc.):
Functional Roles
Organisms
Subsystem Names
Feature Annotations
The infix search may take a while. You will get a page that lists all search results for your search.
Special features
If your page has a defined genome (e.g. Organism Page, Annotation Page), you can type in a number and it will open the Annotation page for the feature ending with that number. This is helpful if you want to browse through Annotation pages of many features in a genome.