Difference between revisions of "SOPs"
Jump to navigation
Jump to search
| (8 intermediate revisions by the same user not shown) | |||
| Line 5: | Line 5: | ||
* Annotation | * Annotation | ||
| − | ** Annotating a genome with the 48-hour service (NMPDR|SOP005) | + | ** Annotation Codes (NMPDR|SOP010) [[Image:Annotation sop.pdf]] |
| − | ** Creation of GO-terms (NMPDR|SOP004) | + | ** Annotating a genome with the 48-hour service (NMPDR|SOP005) [[Image:The48hrserver.pdf]] |
| + | ** Creation of GO-terms (NMPDR|SOP004) [[Image:GO AND PFAM SOP.pdf|thumb|Description]] | ||
*BRC | *BRC | ||
| − | **[[Image: | + | **Releasing GFF3 files(NMPDR|SOP006) [[Image:brc upload sop.pdf]] |
| Line 14: | Line 15: | ||
** [[GeneCalling|Gene calling (NMPDR|SOP001)]] | ** [[GeneCalling|Gene calling (NMPDR|SOP001)]] | ||
** [[Annotation_of_close_strain_sets|Annotation of close strain sets(NMPDR|SOP002)]] | ** [[Annotation_of_close_strain_sets|Annotation of close strain sets(NMPDR|SOP002)]] | ||
| − | ** | + | ** Adding Genomes to the NMPDR (NMPDR|SOP003) [[Image:New_genome_sop.pdf]] |
Latest revision as of 09:27, 6 December 2006
SEED standard operating procedures
To generate data that is useful to the various communities involved in the process of annotation and use of annotations, we make available our standard operating procedures.
- Annotation
- Annotation Codes (NMPDR|SOP010) File:Annotation sop.pdf
- Annotating a genome with the 48-hour service (NMPDR|SOP005) File:The48hrserver.pdf
- Creation of GO-terms (NMPDR|SOP004) File:GO AND PFAM SOP.pdf
- BRC
- Releasing GFF3 files(NMPDR|SOP006) File:Brc upload sop.pdf
- Obsolete SOPs
- Gene calling (NMPDR|SOP001)
- Annotation of close strain sets(NMPDR|SOP002)
- Adding Genomes to the NMPDR (NMPDR|SOP003) File:New genome sop.pdf