SEED Viewer Manual/SearchGene

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Search Gene

In this page you can search for a function in a genome in the context of a subsystem. Two ways of looking for a candidate feature for the function are provided: Looking for already existing features in the genome using a protein-based BLAST search, and trying to find candidates via a translated BLAST search against the DNA sequence of the whole genome. In both cases, a candidate feature is selected (or given to the page) from already existing features with assigned with the functional role that are part of the given subsystem.

Candidate genes found by Similarity (BLAST)?

SearchGene1.png

Is the gene maybe not called?

SearchGene2.png