Difference between revisions of "Keyword Box"
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| − | | FIG gene identifier || fig|100226.1.peg.3361 | + | | '''FIG gene identifier''' || fig|100226.1.peg.3361 |
|- | |- | ||
| − | | The [[Alias|aliases]] || GeneID:1098838, gi|21221828, kegg|sco:SCO3401, NP_627607.1, SCO3401, tr|Q9X8I1, uni|Q9X8I1 | + | | '''The [[Alias|aliases]]''' || GeneID:1098838, gi|21221828, kegg|sco:SCO3401, NP_627607.1, SCO3401, tr|Q9X8I1, uni|Q9X8I1 |
|- | |- | ||
| − | | All words in the functional role || 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine, pyrophosphokinase, amino, hydroxy, hydroxymethylhydroperidine | + | | '''All words in the functional role''' || 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine, pyrophosphokinase, amino, hydroxy, hydroxymethylhydroperidine |
|- | |- | ||
| − | | The genome ID || 100226.1 | + | | '''The genome ID''' || 100226.1 |
|- | |- | ||
| − | | All words in the taxonomy || bacteria, actinobacteria, actinobacteridae, actinomycetales, streptomycineae, streptomycetaceae, streptomyces, coelicolor, a32 | + | | '''All words in the taxonomy''' || bacteria, actinobacteria, actinobacteridae, actinomycetales, streptomycineae, streptomycetaceae, streptomyces, coelicolor, a32 |
|- | |- | ||
| − | | The [[subsystem]] names and classifications || folate, biosynthesis, cofactors, vitamins, prosthetic, groups, pigments, folates, pterines | + | | '''The [[subsystem]] names and classifications''' || folate, biosynthesis, cofactors, vitamins, prosthetic, groups, pigments, folates, pterines |
| + | |- | ||
| + | | '''The EC number''' || 2.7.6.3 | ||
| + | |- | ||
| + | | '''The [[subsystem role]] || 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine, pyrophosphokinase, amino, hydroxy, hydroxymethylhydroperidine | ||
| + | |- | ||
| + | | '''Special Keywords''' || | ||
|} | |} | ||
| − | + | ||
| − | * | + | Notes |
| + | |||
| + | * In the functional role, hyphenated words are stored in their full form (''2-amino-4-hydroxy-6-hydroxymethyldihydropteridine'') as well as broken up on the hyphen boundaries ('''amino- hydroxy hydroxymethyldihydropteridine'''). | ||
| + | * The subsystem role for this gene is the same as the functional role. | ||
| + | * Keywords are case-insensitive | ||
| + | * Special keywords | ||
Revision as of 13:33, 28 July 2007
The NMPDR keyword search works like a typical search engine. You type in the appropriate words, and a list of genes will come back.
The keywords for a specified gene are as follows. The examples shown are for the gene fig|100226.1.peg.3361, which is EC 2.7.6.3 for Streptomyces coelicolor A3(2).
| FIG gene identifier | 100226.1.peg.3361 |
| The aliases | 21221828, kegg|sco:SCO3401, NP_627607.1, SCO3401, tr|Q9X8I1, uni|Q9X8I1 |
| All words in the functional role | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine, pyrophosphokinase, amino, hydroxy, hydroxymethylhydroperidine |
| The genome ID | 100226.1 |
| All words in the taxonomy | bacteria, actinobacteria, actinobacteridae, actinomycetales, streptomycineae, streptomycetaceae, streptomyces, coelicolor, a32 |
| The subsystem names and classifications | folate, biosynthesis, cofactors, vitamins, prosthetic, groups, pigments, folates, pterines |
| The EC number | 2.7.6.3 |
| The subsystem role | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine, pyrophosphokinase, amino, hydroxy, hydroxymethylhydroperidine |
| Special Keywords |
Notes
- In the functional role, hyphenated words are stored in their full form (2-amino-4-hydroxy-6-hydroxymethyldihydropteridine) as well as broken up on the hyphen boundaries (amino- hydroxy hydroxymethyldihydropteridine).
- The subsystem role for this gene is the same as the functional role.
- Keywords are case-insensitive
- Special keywords