Difference between revisions of "SOPs"
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| Line 6: | Line 6: | ||
* Annotation | * Annotation | ||
** [[Image:The48hrserver.pdf]] Annotating a genome with the 48-hour service (NMPDR|SOP005) | ** [[Image:The48hrserver.pdf]] Annotating a genome with the 48-hour service (NMPDR|SOP005) | ||
| − | ** Creation of GO-terms (NMPDR|SOP004) | + | ** [[Image:GO AND PFAM SOP.pdf|thumb|Description]] Creation of GO-terms (NMPDR|SOP004) |
*BRC | *BRC | ||
**[[Image:brc upload sop.pdf]] Releasing GFF3 files(NMPDR|SOP006) | **[[Image:brc upload sop.pdf]] Releasing GFF3 files(NMPDR|SOP006) | ||
Revision as of 09:46, 6 December 2006
SEED standard operating procedures
To generate data that is useful to the various communities involved in the process of annotation and use of annotations, we make available our standard operating procedures.
- Annotation
- File:The48hrserver.pdf Annotating a genome with the 48-hour service (NMPDR|SOP005)
- File:GO AND PFAM SOP.pdf Creation of GO-terms (NMPDR|SOP004)
- BRC
- File:Brc upload sop.pdf Releasing GFF3 files(NMPDR|SOP006)
- Obsolete SOPs
- Gene calling (NMPDR|SOP001)
- Annotation of close strain sets(NMPDR|SOP002)
- File:New genome sop.pdf Adding Genomes to the NMPDR (NMPDR|SOP003)